Package: gdverse 1.3-2

Wenbo Lv

gdverse: Analysis of Spatial Stratified Heterogeneity

Analyzing spatial factors and exploring spatial associations based on the concept of spatial stratified heterogeneity, while also taking into account local spatial dependencies, spatial interpretability, complex spatial interactions, and robust spatial stratification. Additionally, it supports the spatial stratified heterogeneity family established in academic literature.

Authors:Wenbo Lv [aut, cre, cph], Yangyang Lei [aut], Fangmei Liu [aut], Jianwu Yan [aut], Yongze Song [aut], Wufan Zhao [aut]

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NEWS

# Install 'gdverse' in R:
install.packages('gdverse', repos = c('https://stscl.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/stscl/gdverse/issues

Pkgdown site:https://stscl.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:
  • NTDs - NTDs data
  • ndvi - Dataset of NDVI changes and its influencing factors
  • sim - Simulation data.
  • srs_table - Example of spatial information system table
  • srs_wt - Example of spatial information system spatial adjacency matrix

On CRAN:

geographical-detectorgeoinformaticsgeospatial-analysisspatial-statisticsspatial-stratified-heterogeneitycpp

8.69 score 32 stars 1 packages 41 scripts 405 downloads 39 exports 76 dependencies

Last updated 3 days agofrom:bb444ee14b. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 14 2025
R-4.5-win-x86_64OKJan 14 2025
R-4.5-linux-x86_64OKJan 14 2025
R-4.4-win-x86_64OKJan 14 2025
R-4.4-mac-x86_64OKJan 14 2025
R-4.4-mac-aarch64OKJan 14 2025
R-4.3-win-x86_64OKJan 14 2025
R-4.3-mac-x86_64OKJan 14 2025
R-4.3-mac-aarch64OKJan 14 2025

Exports:%>%all2intcpsd_disccpsd_spadeecological_detectorF_informationlossfactor_detectorgdgd_optunidiscgen_permutationsgeodetectorgozhgozh_detectoridsainteraction_detectorleshloess_optscaleopgdpid_idsapsd_ievpsd_pseudoppsd_spadepsmd_pseudoppsmd_spadergdridrisk_detectorrobust_discrpart_discsesu_gozhsesu_opgdspadespd_leshsrs_ecological_detectorsrs_factor_detectorsrs_geodetectorsrs_interaction_detectorsrsgdweight_assign

Dependencies:bootclassclassIntclicolorspacecpp11DBIdeldirdigestdplyre1071fansifarverforcatsfsgenericsgeosphereggforceggfunggplot2gluegtablehereisobandjsonliteKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepanderpatchworkpillarpkgconfigpngpolyclipproxypurrrR6rappdirsRColorBrewerRcppRcppArmadilloRcppEigenRcppTOMLreticulaterlangrpartrprojroots2scalesscatterpiesdsfunsfspspDataspdepstringistringrsystemfontstibbletidyrtidyselecttweenrunitsutf8vctrsviridisLitewithrwkyulab.utils

Consistency With the Results of Existing GDM R Packages

Rendered fromconsistency.Rmdusingknitr::rmarkdownon Jan 14 2025.

Last update: 2024-12-16
Started: 2024-12-16

Geographical Detector(GD)

Rendered fromgd.Rmdusingknitr::rmarkdownon Jan 14 2025.

Last update: 2025-01-11
Started: 2024-09-09

Interactive Detector For Spatial Associations(IDSA)

Rendered fromidsa.Rmdusingknitr::rmarkdownon Jan 14 2025.

Last update: 2025-01-11
Started: 2024-09-09

Optimal Parameters-based Geographical Detector(OPGD)

Rendered fromopgd.Rmdusingknitr::rmarkdownon Jan 14 2025.

Last update: 2025-01-11
Started: 2024-09-09

Robust Geographical Detector & Robust Interaction Detector(RGD & RID)

Rendered fromrgdrid.Rmdusingknitr::rmarkdownon Jan 14 2025.

Last update: 2025-01-12
Started: 2024-09-09

Compare Size Effect of Spatial Units(SESU)

Rendered fromsesu.Rmdusingknitr::rmarkdownon Jan 14 2025.

Last update: 2025-01-11
Started: 2024-09-09

Spatial Heterogeneity Explanation(GOZH & LESH)

Rendered fromshegd.Rmdusingknitr::rmarkdownon Jan 14 2025.

Last update: 2025-01-11
Started: 2024-09-09

Spatial Association Detector(SPADE)

Rendered fromspade.Rmdusingknitr::rmarkdownon Jan 14 2025.

Last update: 2025-01-11
Started: 2024-09-09

Readme and manuals

Help Manual

Help pageTopics
convert all discretized vectors to integerall2int
optimal spatial data discretization based on SPADE q-statisticscpsd_disc
compensated power of spatial determinant(CPSD)cpsd_spade
ecological detectorecological_detector
measure information loss by information entropyF_informationloss
factor detectorfactor_detector
native geographical detector(GD) modelgd
optimal univariate discretization based on geodetector q-statisticgd_optunidisc
generate permutationsgen_permutations
geographical detectorgeodetector
geographically optimal zones-based heterogeneity(GOZH) modelgozh
geographically optimal zones-based heterogeneity detectorgozh_detector
interactive detector for spatial associations(IDSA) modelidsa
interaction detectorinteraction_detector
locally explained stratified heterogeneity(LESH) modellesh
determine optimal spatial data analysis scaleloess_optscale
dataset of NDVI changes and its influencing factorsndvi
NTDs dataNTDs
optimal parameters-based geographical detector(OPGD) modelopgd
IDSA Q-saistics 'PID'pid_idsa
plot ecological detectorplot.ecological_detector
plot factor detector resultplot.factor_detector
plot GD resultplot.gd_result
plot GOZH resultplot.gozh_result
plot IDSA risk resultplot.idsa_result
plot interaction detector resultplot.interaction_detector
plot LESH model resultplot.lesh_result
plot OPGD resultplot.opgd_result
plot RGD resultplot.rgd_result
plot RID resultplot.rid_result
plot risk detectorplot.risk_detector
plot gozh sesuplot.sesu_gozh
plot opgd sesuplot.sesu_opgd
plot SPADE power of spatial and multilevel discretization determinantplot.spade_result
plot spatial rough set-based ecological detectorplot.srs_ecological_detector
plot spatial rough set-based factor detector resultplot.srs_factor_detector
plot spatial rough set-based interaction detector resultplot.srs_interaction_detector
plot SRSGD resultplot.srsgd_result
print ecological detectorprint.ecological_detector
print factor detectorprint.factor_detector
print GD resultprint.gd_result
print GOZH resultprint.gozh_result
print IDSA resultprint.idsa_result
print interaction detectorprint.interaction_detector
print LESH model interaction resultprint.lesh_result
print OPGD resultprint.opgd_result
print RGD resultprint.rgd_result
print RID resultprint.rid_result
print risk detectorprint.risk_detector
print gozh sesuprint.sesu_gozh
print opgd sesuprint.sesu_opgd
print SPADE power of spatial and multilevel discretization determinantprint.spade_result
print spatial rough set-based ecological detectorprint.srs_ecological_detector
print spatial rough set-based factor detectorprint.srs_factor_detector
print spatial rough set-based interaction detectorprint.srs_interaction_detector
print SRSGD resultprint.srsgd_result
PSD of an interaction of explanatory variables (PSD-IEV)psd_iev
calculate power of spatial determinant(PSD) and the corresponding pseudo-p valuepsd_pseudop
power of spatial determinant(PSD)psd_spade
power of spatial and multilevel discretization determinant(PSMD) and the corresponding pseudo-p valuepsmd_pseudop
power of spatial and multilevel discretization determinant(PSMD)psmd_spade
robust geographical detector(RGD) modelrgd
robust interaction detector(RID) modelrid
risk detectorrisk_detector
univariate discretization based on offline change point detectionrobust_disc
discretization of variables based on recursive partitioningrpart_disc
comparison of size effects of spatial units based on GOZHsesu_gozh
comparison of size effects of spatial units based on OPGDsesu_opgd
Simulation data.sim
spatial association detector (SPADE) modelspade
shap power of determinantsspd_lesh
spatial rough set-based ecological detectorsrs_ecological_detector
spatial rough set-based factor detectorsrs_factor_detector
spatial rough set-based geographical detectorsrs_geodetector
spatial rough set-based interaction detectorsrs_interaction_detector
example of spatial information system tablesrs_table
example of spatial information system spatial adjacency matrixsrs_wt
spatial rough set-based geographical detector(SRSGD) modelsrsgd
assign values by weightweight_assign